Index

_

__eq__() (academic_observatory_workflows.model.Repository method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Manifest method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Meta method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile method) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile method)

__hash__() (academic_observatory_workflows.model.Repository method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID method) __post_init__() (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table method) __str__() (academic_observatory_workflows.s5cmd.S5CmdCpConfig method) _bucket_credentials() (academic_observatory_workflows.s5cmd.S5Cmd method) _initialise_command() (academic_observatory_workflows.s5cmd.S5Cmd method) _key() (academic_observatory_workflows.model.Repository method) _transform_obj_data() (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedCustomEncoder method) _uri() (academic_observatory_workflows.s5cmd.S5Cmd method) _url() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient method)

A

academic_observatory (academic_observatory_workflows.config.Tag attribute) academic_observatory_workflows module academic_observatory_workflows.clearbit module academic_observatory_workflows.config module academic_observatory_workflows.crossref_events_telescope module academic_observatory_workflows.crossref_events_telescope.schema module academic_observatory_workflows.crossref_fundref_telescope module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope module academic_observatory_workflows.crossref_fundref_telescope.schema module academic_observatory_workflows.crossref_fundref_telescope.tests module academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope module academic_observatory_workflows.crossref_metadata_telescope module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope module academic_observatory_workflows.crossref_metadata_telescope.schema module academic_observatory_workflows.crossref_metadata_telescope.tests module academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope module academic_observatory_workflows.dags module academic_observatory_workflows.data_quality_workflow module academic_observatory_workflows.data_quality_workflow.data_quality_workflow module academic_observatory_workflows.data_quality_workflow.schema module academic_observatory_workflows.data_quality_workflow.tests module academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow module academic_observatory_workflows.doi_workflow module academic_observatory_workflows.doi_workflow.doi_workflow module academic_observatory_workflows.doi_workflow.schema module academic_observatory_workflows.doi_workflow.sql module academic_observatory_workflows.doi_workflow.tests module academic_observatory_workflows.doi_workflow.tests.test_doi_workflow module academic_observatory_workflows.github module academic_observatory_workflows.model module academic_observatory_workflows.oa_dashboard_workflow module academic_observatory_workflows.oa_dashboard_workflow.institution_ids module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow module academic_observatory_workflows.oa_dashboard_workflow.schema module academic_observatory_workflows.oa_dashboard_workflow.sql module academic_observatory_workflows.oa_dashboard_workflow.tests module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow module academic_observatory_workflows.open_citations_telescope module academic_observatory_workflows.open_citations_telescope.schema module academic_observatory_workflows.openalex_telescope module academic_observatory_workflows.openalex_telescope.openalex_telescope module academic_observatory_workflows.openalex_telescope.schema module academic_observatory_workflows.openalex_telescope.tests module academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope module academic_observatory_workflows.orcid_telescope module academic_observatory_workflows.orcid_telescope.orcid_telescope module academic_observatory_workflows.orcid_telescope.schema module

academic_observatory_workflows.orcid_telescope.tests module academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope module academic_observatory_workflows.pubmed_telescope module academic_observatory_workflows.pubmed_telescope.pubmed_telescope module academic_observatory_workflows.pubmed_telescope.schema module academic_observatory_workflows.pubmed_telescope.tests module academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope module academic_observatory_workflows.ror_telescope module academic_observatory_workflows.ror_telescope.ror_telescope module academic_observatory_workflows.ror_telescope.schema module academic_observatory_workflows.ror_telescope.tests module academic_observatory_workflows.ror_telescope.tests.test_ror_telescope module academic_observatory_workflows.s5cmd module academic_observatory_workflows.scihub_telescope module academic_observatory_workflows.scihub_telescope.schema module academic_observatory_workflows.scopus_telescope module academic_observatory_workflows.scopus_telescope.schema module academic_observatory_workflows.scopus_telescope.scopus_telescope module academic_observatory_workflows.scopus_telescope.tests module academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope module academic_observatory_workflows.tests module academic_observatory_workflows.tests.test_clearbit module academic_observatory_workflows.tests.test_github module academic_observatory_workflows.tests.test_s5cmd module academic_observatory_workflows.tests.test_wikipedia module academic_observatory_workflows.tests.test_zenodo module academic_observatory_workflows.unpaywall_telescope module academic_observatory_workflows.unpaywall_telescope.schema module academic_observatory_workflows.unpaywall_telescope.tests module academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope module academic_observatory_workflows.web_of_science_telescope module academic_observatory_workflows.web_of_science_telescope.schema module academic_observatory_workflows.wikipedia module academic_observatory_workflows.zenodo module access_type (academic_observatory_workflows.model.Paper property) AccessType (class in academic_observatory_workflows.model) add_attributes() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) add_dummy_dag_model() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) add_funders_relationships() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) aggregate_events() (in module academic_observatory_workflows.model) Aggregation (class in academic_observatory_workflows.doi_workflow.doi_workflow) aggregation_field (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) AGGREGATIONS (in module academic_observatory_workflows.doi_workflow.doi_workflow) aggregator (academic_observatory_workflows.model.OtherPlatformCategories attribute) assert_aggregate() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) assert_doi() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) assert_doi_affiliation() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) assert_doi_affiliations() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) assert_doi_events() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) assert_sub_fields() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) Author (class in academic_observatory_workflows.model) AuthorList (in module academic_observatory_workflows.model) authors (academic_observatory_workflows.model.ObservatoryDataset attribute) (academic_observatory_workflows.model.Paper attribute) aws_key (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestCreateOrcidBatchManifest attribute) aws_orcid_key() (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) aws_region_name (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestCreateOrcidBatchManifest attribute)

B

bad_list_fields (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) baseline_files (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease property) BATCH_REGEX (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) bins (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Histogram attribute) black (academic_observatory_workflows.model.AccessType attribute) blob_uris() (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidBatch method) both (academic_observatory_workflows.model.COKIOpenAccess attribute) bq_compare_schemas() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) bq_count_distinct_records() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) bq_count_duplicate_records() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) bq_count_nulls() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow)

bq_delete_table_id (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) bq_load_observatory_dataset() (in module academic_observatory_workflows.model) bq_main_table_id (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) bq_query_to_gcs() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) bq_set_table_expiry() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) bq_snapshot_table_id (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) bq_update_table_expiration() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) bq_upsert_table_id (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) bronze (academic_observatory_workflows.model.AccessType attribute) build_path (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease property) build_query() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method)

C

calc_percent() (in module academic_observatory_workflows.model) CALL_LIMIT (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClientThrottleLimits attribute) CALL_PERIOD (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClientThrottleLimits attribute) category (academic_observatory_workflows.model.Repository attribute) change_pubmed_list_structure() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) Changefile (class in academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) changefile_download_url() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) CHANGEFILES_DOWNLOAD_URL (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) CHANGEFILES_URL (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) changefiles_url() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) check_release_exists() (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) cited_by (academic_observatory_workflows.model.Paper attribute) clean_url() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) clear_task_queue() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) clearbit_download_logo() (in module academic_observatory_workflows.clearbit) closed (academic_observatory_workflows.model.COKIOpenAccess attribute) COKIOpenAccess (class in academic_observatory_workflows.model) construct_module_path() (in module academic_observatory_workflows.config) coordinates (academic_observatory_workflows.model.Institution attribute) country (academic_observatory_workflows.model.Institution attribute) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute) country_code (academic_observatory_workflows.model.Funder attribute) (academic_observatory_workflows.model.Institution attribute)

country_code_2 (academic_observatory_workflows.model.Institution attribute) country_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) create_dag() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) (in module academic_observatory_workflows.doi_workflow.doi_workflow) (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) (in module academic_observatory_workflows.ror_telescope.ror_telescope) (in module academic_observatory_workflows.scopus_telescope.scopus_telescope) (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) create_data_quality_record() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) create_new_version() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) create_openalex_dataset() (in module academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) create_orcid_batch_manifest() (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) create_table_hash_id() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) CrossrefFundrefRelease (class in academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) CrossrefMetadataRelease (class in academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) current_entries (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) current_merged_ids (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property)

D

dag_id (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestCreateOrcidBatchManifest attribute) data (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Histogram attribute) data_file_pattern() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) data_quality (academic_observatory_workflows.config.Tag attribute) data_uri (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) Datafile (class in academic_observatory_workflows.pubmed_telescope.pubmed_telescope) dataset_id (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute) (academic_observatory_workflows.doi_workflow.doi_workflow.Table attribute) date_between_dates() (in module academic_observatory_workflows.model) DEFAULT_KEY_QUOTA (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtilWorker attribute) delete_file() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) delete_files (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease property) delete_table (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) deletes (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile attribute) descriptions_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) doi (academic_observatory_workflows.model.Funder attribute) (academic_observatory_workflows.model.Paper attribute) DOI_FIXTURES_FOLDER (in module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow)

doi_prefix (academic_observatory_workflows.model.Publisher attribute) DOI_SCHEMA_FOLDER (in module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) DOIRelease (class in academic_observatory_workflows.doi_workflow.doi_workflow) domain (academic_observatory_workflows.model.OtherPlatformCategories attribute) download_blob_name (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease property) download_datafiles() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) download_file_path (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile property) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile property) download_from_bucket() (academic_observatory_workflows.s5cmd.S5Cmd method) download_parallel() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) download_period() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) download_uri (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease property) download_url (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.ZenodoVersion attribute) download_worker() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) downloaded_records (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease property) dt_fmt (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow attribute)

E

encode() (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedCustomEncoder method) end_year (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute) END_YEAR (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) endpoint_id (academic_observatory_workflows.model.Repository attribute) EntityHistograms (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) EntityStats (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) Event (class in academic_observatory_workflows.model)

event_date (academic_observatory_workflows.model.Event attribute) EVENT_TYPES (in module academic_observatory_workflows.model) events (academic_observatory_workflows.model.Paper attribute) EventsList (in module academic_observatory_workflows.model) existing_records (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidBatch property) expected_records() (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidBatch method) extract_file_path (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile property)

F

fetch_institution_logo() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) fetch_institution_logos() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) fetch_manifest() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) fetch_merged_ids() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) fetch_ror_affiliations() (in module academic_observatory_workflows.doi_workflow.doi_workflow) fetch_wikipedia_descriptions() (in module academic_observatory_workflows.wikipedia) fetch_wikipedia_descriptions_batch() (in module academic_observatory_workflows.wikipedia) FieldOfStudy (class in academic_observatory_workflows.model) FieldOfStudyList (in module academic_observatory_workflows.model) fields_of_study (academic_observatory_workflows.model.ObservatoryDataset attribute) (academic_observatory_workflows.model.Paper attribute) file_name (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry property) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId property) first_run_folder (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) first_run_main_table (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) first_run_records (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) FIXTURES_FOLDER (in module academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope) (in module academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope) (in module academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow) (in module academic_observatory_workflows.doi_workflow.tests.test_doi_workflow) (in module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) (in module academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) (in module academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) (in module academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope) (in module academic_observatory_workflows.ror_telescope.tests.test_ror_telescope) (in module academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) (in module academic_observatory_workflows.tests.test_clearbit) (in module academic_observatory_workflows.tests.test_wikipedia) (in module academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope) flatten_schema() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope)

from_dict() (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease static method) (academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope.CrossrefMetadataRelease static method) (academic_observatory_workflows.doi_workflow.doi_workflow.DOIRelease static method) (academic_observatory_workflows.model.Repository static method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease static method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Manifest static method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry static method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId static method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Meta static method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity static method) (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease static method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease static method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile method) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease static method) (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusRelease static method) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile static method) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.UnpaywallRelease static method) full_table_id (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table property) Funder (class in academic_observatory_workflows.model) FunderList (in module academic_observatory_workflows.model) funders (academic_observatory_workflows.model.ObservatoryDataset attribute) (academic_observatory_workflows.model.Paper attribute) funding_body_subtype (academic_observatory_workflows.model.Funder attribute) FUNDING_BODY_SUBTYPES (in module academic_observatory_workflows.model) funding_body_type (academic_observatory_workflows.model.Funder attribute) FUNDING_BODY_TYPES (in module academic_observatory_workflows.model) FUNDREF_COUNTRY_CODES (in module academic_observatory_workflows.model) FUNDREF_REGIONS (in module academic_observatory_workflows.model)

G

generated_schema_path (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) get() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient.MockMetadata class method) get_affiliations() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusJsonParser static method) get_api_key() (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) get_authors() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusJsonParser static method) get_aws_key() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) get_deposition() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) get_entity() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) get_identifier_list() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusJsonParser static method) get_next_page_url() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient static method) get_reset_date_from_error() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient static method) get_snapshot_date() (in module academic_observatory_workflows.doi_workflow.doi_workflow) get_snapshot_file_name() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope)

get_table_expiry() (in module academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) get_task_id() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) get_unpaywall_changefiles() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) get_versions() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) get_wikipedia_title() (in module academic_observatory_workflows.wikipedia) getcode() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.MockUrlResponse method) getheader() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.MockUrlResponse method) gold (academic_observatory_workflows.model.AccessType attribute) gold_doaj (academic_observatory_workflows.model.AccessType attribute) green (academic_observatory_workflows.model.AccessType attribute) green_only (academic_observatory_workflows.model.AccessType attribute) grid_id (academic_observatory_workflows.model.Institution attribute) group_by_time_field (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute)

H

has_merged_ids (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) Histogram (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow)

histograms (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats attribute) hybrid (academic_observatory_workflows.model.AccessType attribute) (academic_observatory_workflows.model.PublisherCategories attribute)

I

id (academic_observatory_workflows.model.Author attribute) (academic_observatory_workflows.model.FieldOfStudy attribute) (academic_observatory_workflows.model.Funder attribute) (academic_observatory_workflows.model.Institution attribute) (academic_observatory_workflows.model.Journal attribute) (academic_observatory_workflows.model.Paper attribute) (academic_observatory_workflows.model.Publisher attribute) in_scihub (academic_observatory_workflows.model.Paper attribute) in_unpaywall (academic_observatory_workflows.model.Paper attribute) INCLUSION_THRESHOLD (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) inputs (academic_observatory_workflows.doi_workflow.doi_workflow.SQLQuery attribute) institution (academic_observatory_workflows.model.Author attribute) (academic_observatory_workflows.model.OtherPlatformCategories attribute) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute)

Institution (class in academic_observatory_workflows.model) INSTITUTION_IDS (in module academic_observatory_workflows.oa_dashboard_workflow.institution_ids) institution_ids_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) InstitutionList (in module academic_observatory_workflows.model) institutions (academic_observatory_workflows.model.ObservatoryDataset attribute) intermediate_path (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease property) invalid_key_orcid (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) is_in_dqc_table() (in module academic_observatory_workflows.data_quality_workflow.data_quality_workflow) is_lat_lng_valid() (in module academic_observatory_workflows.ror_telescope.ror_telescope) is_sharded (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute)

J

journal (academic_observatory_workflows.model.Paper attribute) Journal (class in academic_observatory_workflows.model)

journals (academic_observatory_workflows.model.Publisher attribute) json() (academic_observatory_workflows.tests.test_zenodo.MockResponse method)

L

last_updated (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute) latest_modified_record_date() (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) level (academic_observatory_workflows.model.FieldOfStudy attribute) license (academic_observatory_workflows.model.Journal attribute) LICENSES (in module academic_observatory_workflows.model)

list_releases() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) list_ror_records() (in module academic_observatory_workflows.ror_telescope.ror_telescope) load_datafile() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) load_json() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) logos_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method)

M

make_aggregate_table() (in module academic_observatory_workflows.model) make_authors() (in module academic_observatory_workflows.model) make_changefiles() (in module academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope) make_crossref_events() (in module academic_observatory_workflows.model) make_crossref_fundref() (in module academic_observatory_workflows.model) make_crossref_metadata() (in module academic_observatory_workflows.model) make_doi() (in module academic_observatory_workflows.model) make_doi_countries() (in module academic_observatory_workflows.model) make_doi_events() (in module academic_observatory_workflows.model) make_doi_funders() (in module academic_observatory_workflows.model) make_doi_institutions() (in module academic_observatory_workflows.model) make_doi_journals() (in module academic_observatory_workflows.model) make_doi_publishers() (in module academic_observatory_workflows.model) make_doi_regions() (in module academic_observatory_workflows.model) make_doi_subregions() (in module academic_observatory_workflows.model) make_doi_table() (in module academic_observatory_workflows.model) make_draft_version() (in module academic_observatory_workflows.zenodo) make_entity_stats() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) make_expected_build_files() (in module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) make_fields_of_study() (in module academic_observatory_workflows.model) make_first_run_message() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) make_funders() (in module academic_observatory_workflows.model) make_logo_url() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) make_no_merged_ids_msg() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) make_no_updated_data_msg() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) make_observatory_dataset() (in module academic_observatory_workflows.model) make_open_citations() (in module academic_observatory_workflows.model) make_openalex_dataset() (in module academic_observatory_workflows.model) make_orcid() (in module academic_observatory_workflows.model) make_papers() (in module academic_observatory_workflows.model) make_publishers() (in module academic_observatory_workflows.model) make_pubmed() (in module academic_observatory_workflows.model) make_query() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) make_scihub() (in module academic_observatory_workflows.model) make_snapshot_filename() (in module academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope) make_snapshot_url() (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) make_sql_queries() (in module academic_observatory_workflows.doi_workflow.doi_workflow) make_unpaywall() (in module academic_observatory_workflows.model) make_url() (academic_observatory_workflows.zenodo.Zenodo method) Manifest (class in academic_observatory_workflows.openalex_telescope.openalex_telescope) MANIFEST_HEADER (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) ManifestEntry (class in academic_observatory_workflows.openalex_telescope.openalex_telescope) max (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats attribute) MAX_QUERIES (in module academic_observatory_workflows.doi_workflow.doi_workflow) MAX_REPOSITORIES (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) MAX_RESULTS (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient attribute) maxDiff (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow attribute) median (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats attribute) merge_schema_maps() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) merge_upserts_and_deletes() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) merged_delete_file_path (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease property) merged_delete_transfer_uri (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease property) merged_ids_schema_file_path (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) merged_ids_uri (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) merged_upsert_file_path (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile property) merged_upsert_uri_blob_pattern (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease property) MergedId (class in academic_observatory_workflows.openalex_telescope.openalex_telescope) Meta (class in academic_observatory_workflows.openalex_telescope.openalex_telescope) min (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats attribute) mismatched_orcid (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) missing_records (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidBatch property) MockResponse (class in academic_observatory_workflows.tests.test_zenodo) MockUrlResponse (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) MockZenodo (class in academic_observatory_workflows.tests.test_zenodo) module academic_observatory_workflows academic_observatory_workflows.clearbit academic_observatory_workflows.config academic_observatory_workflows.crossref_events_telescope academic_observatory_workflows.crossref_events_telescope.schema academic_observatory_workflows.crossref_fundref_telescope academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope academic_observatory_workflows.crossref_fundref_telescope.schema academic_observatory_workflows.crossref_fundref_telescope.tests academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope academic_observatory_workflows.crossref_metadata_telescope academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope academic_observatory_workflows.crossref_metadata_telescope.schema academic_observatory_workflows.crossref_metadata_telescope.tests academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope academic_observatory_workflows.dags academic_observatory_workflows.data_quality_workflow academic_observatory_workflows.data_quality_workflow.data_quality_workflow academic_observatory_workflows.data_quality_workflow.schema academic_observatory_workflows.data_quality_workflow.tests academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow academic_observatory_workflows.doi_workflow academic_observatory_workflows.doi_workflow.doi_workflow academic_observatory_workflows.doi_workflow.schema academic_observatory_workflows.doi_workflow.sql academic_observatory_workflows.doi_workflow.tests academic_observatory_workflows.doi_workflow.tests.test_doi_workflow academic_observatory_workflows.github academic_observatory_workflows.model academic_observatory_workflows.oa_dashboard_workflow academic_observatory_workflows.oa_dashboard_workflow.institution_ids academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow academic_observatory_workflows.oa_dashboard_workflow.schema academic_observatory_workflows.oa_dashboard_workflow.sql academic_observatory_workflows.oa_dashboard_workflow.tests academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow academic_observatory_workflows.open_citations_telescope academic_observatory_workflows.open_citations_telescope.schema academic_observatory_workflows.openalex_telescope academic_observatory_workflows.openalex_telescope.openalex_telescope academic_observatory_workflows.openalex_telescope.schema academic_observatory_workflows.openalex_telescope.tests academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope academic_observatory_workflows.orcid_telescope academic_observatory_workflows.orcid_telescope.orcid_telescope academic_observatory_workflows.orcid_telescope.schema academic_observatory_workflows.orcid_telescope.tests academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope academic_observatory_workflows.pubmed_telescope academic_observatory_workflows.pubmed_telescope.pubmed_telescope academic_observatory_workflows.pubmed_telescope.schema academic_observatory_workflows.pubmed_telescope.tests academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope academic_observatory_workflows.ror_telescope academic_observatory_workflows.ror_telescope.ror_telescope academic_observatory_workflows.ror_telescope.schema academic_observatory_workflows.ror_telescope.tests academic_observatory_workflows.ror_telescope.tests.test_ror_telescope academic_observatory_workflows.s5cmd academic_observatory_workflows.scihub_telescope academic_observatory_workflows.scihub_telescope.schema academic_observatory_workflows.scopus_telescope academic_observatory_workflows.scopus_telescope.schema academic_observatory_workflows.scopus_telescope.scopus_telescope academic_observatory_workflows.scopus_telescope.tests academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope academic_observatory_workflows.tests academic_observatory_workflows.tests.test_clearbit academic_observatory_workflows.tests.test_github academic_observatory_workflows.tests.test_s5cmd academic_observatory_workflows.tests.test_wikipedia academic_observatory_workflows.tests.test_zenodo academic_observatory_workflows.unpaywall_telescope academic_observatory_workflows.unpaywall_telescope.schema academic_observatory_workflows.unpaywall_telescope.tests academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope academic_observatory_workflows.web_of_science_telescope academic_observatory_workflows.web_of_science_telescope.schema academic_observatory_workflows.wikipedia academic_observatory_workflows.zenodo

N

n_items (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats attribute) n_outputs (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityHistograms attribute) n_outputs_open (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityHistograms attribute) name (academic_observatory_workflows.doi_workflow.doi_workflow.SQLQuery attribute) (academic_observatory_workflows.model.Author attribute) (academic_observatory_workflows.model.FieldOfStudy attribute) (academic_observatory_workflows.model.Funder attribute) (academic_observatory_workflows.model.Institution attribute) (academic_observatory_workflows.model.Journal attribute) (academic_observatory_workflows.model.Publisher attribute) (academic_observatory_workflows.model.Repository attribute) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile attribute)

new_funder_template() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) no_guarantees (academic_observatory_workflows.model.PublisherCategories attribute)

O

oa (academic_observatory_workflows.model.AccessType attribute) oa_coki (academic_observatory_workflows.model.Paper property) oa_dashboard_subset() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) oa_dashboard_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) oa_journal (academic_observatory_workflows.model.PublisherCategories attribute) OaDashboardRelease (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) object_key (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry property) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId property) observatory_agg_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) ObservatoryDataset (class in academic_observatory_workflows.model) open (academic_observatory_workflows.model.COKIOpenAccess attribute) OpenAlexEntity (class in academic_observatory_workflows.openalex_telescope.openalex_telescope) ORCID_AWS_SUMMARIES_BUCKET (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) orcid_batch_names() (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) orcid_batches() (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease method)

orcid_directory_paths (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease property) ORCID_RECORD_REGEX (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) ORCID_REGEX (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) OrcidBatch (class in academic_observatory_workflows.orcid_telescope.orcid_telescope) OrcidRelease (class in academic_observatory_workflows.orcid_telescope.orcid_telescope) OrcidTestRecords (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) other_internet (academic_observatory_workflows.model.OtherPlatformCategories attribute) other_platform (academic_observatory_workflows.model.COKIOpenAccess attribute) other_platform_categories (academic_observatory_workflows.model.COKIOpenAccess attribute) other_platform_only (academic_observatory_workflows.model.COKIOpenAccess attribute) OtherPlatformCategories (class in academic_observatory_workflows.model) out_path (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease property) output_clustering_fields (academic_observatory_workflows.doi_workflow.doi_workflow.SQLQuery attribute) output_table (academic_observatory_workflows.doi_workflow.doi_workflow.SQLQuery attribute) output_type (academic_observatory_workflows.model.Paper attribute) OUTPUT_TYPES (in module academic_observatory_workflows.model)

P

p_outputs_open (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityHistograms attribute) Paper (class in academic_observatory_workflows.model) PaperList (in module academic_observatory_workflows.model) papers (academic_observatory_workflows.model.Institution attribute) (academic_observatory_workflows.model.ObservatoryDataset attribute) parse_articles() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) parse_deletes() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) parse_fundref_registry_rdf() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) parse_json() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusJsonParser static method) pmh_domain (academic_observatory_workflows.model.Repository attribute) PMID (class in academic_observatory_workflows.pubmed_telescope.pubmed_telescope) preprint (academic_observatory_workflows.model.OtherPlatformCategories attribute) primary_key (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute) project_id (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute) (academic_observatory_workflows.doi_workflow.doi_workflow.Table attribute) project_path() (in module academic_observatory_workflows.config) public (academic_observatory_workflows.model.OtherPlatformCategories attribute)

publish() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) publish_new_version() (in module academic_observatory_workflows.zenodo) published_date (academic_observatory_workflows.model.Paper attribute) publisher (academic_observatory_workflows.model.COKIOpenAccess attribute) (academic_observatory_workflows.model.Paper attribute) Publisher (class in academic_observatory_workflows.model) publisher_categories (academic_observatory_workflows.model.COKIOpenAccess attribute) publisher_is_free_to_read (academic_observatory_workflows.model.Paper attribute) publisher_license (academic_observatory_workflows.model.Paper attribute) publisher_only (academic_observatory_workflows.model.COKIOpenAccess attribute) PublisherCategories (class in academic_observatory_workflows.model) PublisherList (in module academic_observatory_workflows.model) publishers (academic_observatory_workflows.model.ObservatoryDataset attribute) PubMedCustomEncoder (class in academic_observatory_workflows.pubmed_telescope.pubmed_telescope) PubMedRelease (class in academic_observatory_workflows.pubmed_telescope.pubmed_telescope) PubmedUpdatefile (class in academic_observatory_workflows.pubmed_telescope.pubmed_telescope)

Q

query_table() (in module academic_observatory_workflows.doi_workflow.tests.test_doi_workflow) (in module academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope)

QUEUE_WAIT_TIME (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtilWorker attribute) QUOTA_EXCEED_ERROR_PREFIX (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient attribute)

R

read() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.MockUrlResponse method) README (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) recursive_funders() (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) region (academic_observatory_workflows.model.Funder attribute) (academic_observatory_workflows.model.Institution attribute) relate_to_countries (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_funders (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_groups (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_institutions (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_journals (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_members (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) relate_to_publishers (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) release_date (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.ZenodoVersion attribute) release_folder (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property)

RELEASES_URL (in module academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope) remove_text_between_brackets() (in module academic_observatory_workflows.wikipedia) repositories (academic_observatory_workflows.model.ObservatoryDataset attribute) (academic_observatory_workflows.model.Paper attribute) repository (academic_observatory_workflows.model.Institution attribute) Repository (class in academic_observatory_workflows.model) RepositoryList (in module academic_observatory_workflows.model) RESULTS_PER_PAGE (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient attribute) retrieve() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusClient method) ror_id (academic_observatory_workflows.model.Institution attribute) (academic_observatory_workflows.model.Repository attribute) ROR_SCHEMA_FOLDER (in module academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) ror_table_id() (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) ror_to_ror_hierarchy_index() (in module academic_observatory_workflows.doi_workflow.doi_workflow) RorRelease (class in academic_observatory_workflows.ror_telescope.ror_telescope)

S

s3_uri_parts() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) S5Cmd (class in academic_observatory_workflows.s5cmd) S5CmdCpConfig (class in academic_observatory_workflows.s5cmd) save_json() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) save_oa_dashboard_dataset() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) save_pubmed_jsonl() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) save_pubmed_merged_upserts() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) save_zenodo_dataset() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) schema_file_path (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) schema_file_path() (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease method) ScopusClient (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) ScopusClientThrottleLimits (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) ScopusJsonParser (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) ScopusRelease (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) ScopusUtility (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) ScopusUtilWorker (class in academic_observatory_workflows.scopus_telescope.scopus_telescope) second_run_folder (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) second_run_main_table (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) second_run_records (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute)

SENSOR_DAG_IDS (in module academic_observatory_workflows.doi_workflow.doi_workflow) setUp() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow method) (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) setup_tables() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow method) shard_limit (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute) sharded (academic_observatory_workflows.doi_workflow.doi_workflow.Table attribute) shorten_text_full_sentences() (in module academic_observatory_workflows.wikipedia) sleep_if_needed() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) snapshot_date (academic_observatory_workflows.doi_workflow.doi_workflow.Table attribute) SNAPSHOT_URL (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) snapshot_url() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) sort_events() (in module academic_observatory_workflows.model) source (academic_observatory_workflows.model.Event attribute) SQLQuery (class in academic_observatory_workflows.doi_workflow.doi_workflow) start_year (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute) START_YEAR (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) Stats (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow) subregion (academic_observatory_workflows.model.Institution attribute)

T

Table (class in academic_observatory_workflows.data_quality_workflow.data_quality_workflow) (class in academic_observatory_workflows.doi_workflow.doi_workflow) table_description (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity property) table_id (academic_observatory_workflows.data_quality_workflow.data_quality_workflow.Table attribute) (academic_observatory_workflows.doi_workflow.doi_workflow.Table property) table_name (academic_observatory_workflows.doi_workflow.doi_workflow.Aggregation attribute) (academic_observatory_workflows.doi_workflow.doi_workflow.Table attribute) Tag (class in academic_observatory_workflows.config) TEMP_TABLE_DESCRIPTION (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) test_add_attributes() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_bq_compare_schemas() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_bq_count_distinct_records() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_bq_count_duplicate_records() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_bq_count_nulls() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_build_query() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_change_pubmed_list_structure() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_changefile() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_changefile_download_url() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_changefiles_url() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_check_release_exists() (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) test_clean_url() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestFunctions method) test_clear_task_queue() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtility method) test_clearbit_download_logo() (academic_observatory_workflows.tests.test_clearbit.TestClearbitUtils method) test_create_dq_record() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_create_new_version() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_create_orcid_batch_manifest() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestCreateOrcidBatchManifest method), [1] test_create_table_hash_id() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_ctor() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_dag_load() (academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope.TestCrossrefFundrefTelescope method) (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityWorkflow method) (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow method) (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexTelescope method) (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestOrcidTelescope method) (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedTelescope method) (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusTelescope method) (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallTelescope method) test_dag_structure() (academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope.TestCrossrefFundrefTelescope method) (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityWorkflow method) (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow method) (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexTelescope method) (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestOrcidTelescope method) (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedTelescope method) (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusTelescope method) (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallTelescope method) test_delete_file() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_download_datafiles() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_download_failures() (academic_observatory_workflows.tests.test_s5cmd.TestS5Cmd method) test_download_from_bucket() (academic_observatory_workflows.tests.test_s5cmd.TestS5Cmd method) test_download_parallel() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_download_period() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_download_worker_download_exit() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_download_worker_download_quota_exceed_retry_exit() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_download_worker_download_uncaught_exception() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_download_worker_empty_retry_exit() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_error_record() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestTransformOrcidRecord method) test_fetch_manifest() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_fetch_merged_ids() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_fetch_ror_affiliations() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) test_fetch_wiki_description() (academic_observatory_workflows.tests.test_wikipedia.TestWikipedia method) test_get_affiliations() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusJsonParser method) test_get_authors() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusJsonParser method) test_get_deposition() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_get_identifier_list() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusJsonParser method) test_get_institution_logo() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestFunctions method) test_get_next_page_url() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_get_reset_date_from_error() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_get_snapshot_file_name() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_get_unpaywall_changefiles() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_get_versions() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_invalid_key_record() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestTransformOrcidRecord method) test_is_in_dqc_table() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_is_lat_lng_valid() (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) test_latest_modified_record_date() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestExtras method) test_list_releases() (academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope.TestCrossrefFundrefTelescope method) test_list_ror_records() (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) test_load_data_glob() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestFunctions method) test_load_datafile() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_make_draft_version() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_make_entity_stats() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestFunctions method) test_make_logo_url() (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestFunctions method) test_make_query() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_make_url() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_manifest() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_manifest_entry() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_merge_schema_maps() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_merge_upserts_and_deletes() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_merged_id() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_meta() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_mismatched_orcid() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestTransformOrcidRecord method) test_no_results() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestCreateOrcidBatchManifest method) test_openalex_entity() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_orcid_batch() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestOrcidBatch method) test_orcid_batch_names() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestExtras method) test_parse_articles() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_parse_deletes() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_parse_json() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusJsonParser method) test_publish() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_publish_new_version() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_PubMedCustomEncoder() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_remove_text_between_brackets() (academic_observatory_workflows.tests.test_wikipedia.TestWikipedia method) test_retrieve() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_exceeded() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_max_results_exceeded() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_no_next_url() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_noresults() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_totalresults_zero() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_retrieve_unexpected_httpcode() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_ror_to_ror_hierarchy_index() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method)

test_s3_uri_parts() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_save_pubmed_jsonl() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_save_pubmed_merged_upserts() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_scopus_client_user_agent() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusClient method) test_shorten_text_full_sentences() (academic_observatory_workflows.tests.test_wikipedia.TestWikipedia method) test_sleep_if_needed_needed() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_sleep_if_needed_not_needed() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_snapshot_url() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_str() (academic_observatory_workflows.tests.test_s5cmd.TestS5CmdCpConfig method) test_table_object() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityUtils method) test_telescope() (academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope.TestCrossrefFundrefTelescope method) (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) (academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow.TestOaDashboardWorkflow method) (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexTelescope method) (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestOrcidTelescope method) (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedTelescope method) (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusTelescope method) (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallTelescope method) test_transform_file() (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) test_transform_item() (academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope.TestCrossrefMetadataTelescope method) test_transform_object() (academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope.TestOpenAlexUtils method) test_transform_pubmed() (academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope.TestPubMedUtils method) test_transform_ror() (academic_observatory_workflows.ror_telescope.tests.test_ror_telescope.TestRorTelescope method) test_trigger_repository_dispatch() (academic_observatory_workflows.tests.test_github.TestGithub method) test_unpaywall_filename_to_datetime() (academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope.TestUnpaywallUtils method) test_update() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_update_reset_date() (academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope.TestScopusUtilWorker method) test_upload_failures() (academic_observatory_workflows.tests.test_s5cmd.TestS5Cmd method) test_upload_file() (academic_observatory_workflows.tests.test_zenodo.TestZenodo method) test_upload_to_bucket() (academic_observatory_workflows.tests.test_s5cmd.TestS5Cmd method) test_valid_record() (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.TestTransformOrcidRecord method) test_workflow() (academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow.TestDataQualityWorkflow method) TestClearbitUtils (class in academic_observatory_workflows.tests.test_clearbit) TestCreateOrcidBatchManifest (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope), [1] TestCrossrefFundrefTelescope (class in academic_observatory_workflows.crossref_fundref_telescope.tests.test_crossref_fundref_telescope) TestCrossrefMetadataTelescope (class in academic_observatory_workflows.crossref_metadata_telescope.tests.test_crossref_metadata_telescope) TestDataQualityUtils (class in academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow) TestDataQualityWorkflow (class in academic_observatory_workflows.data_quality_workflow.tests.test_data_quality_workflow) TestDoiWorkflow (class in academic_observatory_workflows.doi_workflow.tests.test_doi_workflow) TestExtras (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) TestFunctions (class in academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) TestGithub (class in academic_observatory_workflows.tests.test_github) TestOaDashboardWorkflow (class in academic_observatory_workflows.oa_dashboard_workflow.tests.test_oa_dashboard_workflow) TestOpenAlexTelescope (class in academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) TestOpenAlexUtils (class in academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) TestOrcidBatch (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) TestOrcidTelescope (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) TestPubMedTelescope (class in academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope) TestPubMedUtils (class in academic_observatory_workflows.pubmed_telescope.tests.test_pubmed_telescope) TestRorTelescope (class in academic_observatory_workflows.ror_telescope.tests.test_ror_telescope) TestS5Cmd (class in academic_observatory_workflows.tests.test_s5cmd) TestS5CmdCpConfig (class in academic_observatory_workflows.tests.test_s5cmd) TestScopusClient (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestScopusClient.MockMetadata (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestScopusJsonParser (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestScopusTelescope (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestScopusUtility (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestScopusUtilWorker (class in academic_observatory_workflows.scopus_telescope.tests.test_scopus_telescope) TestTransformOrcidRecord (class in academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope) TestUnpaywallTelescope (class in academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope) TestUnpaywallUtils (class in academic_observatory_workflows.unpaywall_telescope.tests.test_unpaywall_telescope) TestWikipedia (class in academic_observatory_workflows.tests.test_wikipedia) TestZenodo (class in academic_observatory_workflows.tests.test_zenodo) timestamp_fields (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) title (academic_observatory_workflows.model.Paper attribute) to_affiliations_list() (in module academic_observatory_workflows.model) to_dict() (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease method) (academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope.CrossrefMetadataRelease method) (academic_observatory_workflows.doi_workflow.doi_workflow.DOIRelease method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityHistograms method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.EntityStats method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Histogram method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.OaDashboardRelease method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats method) (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.ZenodoVersion method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Manifest method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.Meta method) (academic_observatory_workflows.openalex_telescope.openalex_telescope.OpenAlexEntity method) (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease method) (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile method) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease method) (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusRelease method) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile method) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.UnpaywallRelease method) to_str() (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID method) transfer_blob_pattern() (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease method) transform_baseline_file_path (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile property) transform_blob_name (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease property) (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusRelease property) transform_delete_file_path (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile property) transform_file() (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) transform_file_path (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope.Changefile property) transform_item() (in module academic_observatory_workflows.crossref_metadata_telescope.crossref_metadata_telescope) transform_object() (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) transform_orcid_record() (in module academic_observatory_workflows.orcid_telescope.orcid_telescope) transform_pubmed() (in module academic_observatory_workflows.pubmed_telescope.pubmed_telescope) transform_ror() (in module academic_observatory_workflows.ror_telescope.ror_telescope) transform_to_db_format() (in module academic_observatory_workflows.scopus_telescope.scopus_telescope) transform_upsert_file_path (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.Datafile property) transform_uri (academic_observatory_workflows.crossref_fundref_telescope.crossref_fundref_telescope.CrossrefFundrefRelease property) (academic_observatory_workflows.ror_telescope.ror_telescope.RorRelease property) traverse_ancestors() (in module academic_observatory_workflows.doi_workflow.doi_workflow) trigger_repository_dispatch() (in module academic_observatory_workflows.github) type (academic_observatory_workflows.model.Paper attribute) types (academic_observatory_workflows.model.Institution attribute)

U

unknown (academic_observatory_workflows.model.OtherPlatformCategories attribute) unpaywall_filename_to_datetime() (in module academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) UnpaywallRelease (class in academic_observatory_workflows.unpaywall_telescope.unpaywall_telescope) update() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) update_db() (academic_observatory_workflows.doi_workflow.tests.test_doi_workflow.TestDoiWorkflow method) update_reset_date() (academic_observatory_workflows.scopus_telescope.scopus_telescope.ScopusUtility static method) updated_date (academic_observatory_workflows.openalex_telescope.openalex_telescope.ManifestEntry property) (academic_observatory_workflows.openalex_telescope.openalex_telescope.MergedId property)

updatefiles (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedRelease property) upload_file() (academic_observatory_workflows.tests.test_zenodo.MockZenodo method) (academic_observatory_workflows.zenodo.Zenodo method) upload_folder_to_s3() (in module academic_observatory_workflows.openalex_telescope.tests.test_openalex_telescope) upload_to_bucket() (academic_observatory_workflows.s5cmd.S5Cmd method) UPSERT_BYTE_LIMIT (in module academic_observatory_workflows.openalex_telescope.openalex_telescope) upsert_files (academic_observatory_workflows.orcid_telescope.orcid_telescope.OrcidRelease property) upsert_table (academic_observatory_workflows.orcid_telescope.tests.test_orcid_telescope.OrcidTestRecords attribute) upserts (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubmedUpdatefile attribute) url_domain (academic_observatory_workflows.model.Repository attribute)

V

value (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID attribute)

Version (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PMID attribute)

W

WIKI_MAX_TITLES (in module academic_observatory_workflows.wikipedia)

write_as_single_field (academic_observatory_workflows.pubmed_telescope.pubmed_telescope.PubMedCustomEncoder attribute)

Y

yield_data_glob() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow)

Z

Zenodo (class in academic_observatory_workflows.zenodo) zenodo_subset() (in module academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow)

zenodo_versions (academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow.Stats attribute) ZenodoVersion (class in academic_observatory_workflows.oa_dashboard_workflow.oa_dashboard_workflow)